Barcode of Life Data Systems

Barcode of Life Data Systems (commonly known as BOLD) is a sequence database specifically devoted to DNA barcoding. It also provides an online platform for analyzing DNA sequences.^[1] As of 2013, BOLD included over 2.5 million DNA barcode sequences from over 190,000 species.^[2]

References

↑ Ratnasingham, Sujeevan; Paul D. N. Hebert (2007). "BOLD: The Barcode of Life Data System (http://www.barcodinglife.org)". Molecular Ecology Notes. 7 (3): 355–364. doi:10.1111/j.1471-8286.2007.01678.x. PMID 18784790.
↑ Stoeckle, Mark (November–December 2013). "DNA Barcoding Ready for Breakout". GeneWatch. 26 (5).

Bioinformatics

Databases	Sequence databases: GenBank, European Nucleotide Archive and DNA Data Bank of Japan Secondary databases: UniProt, database of protein sequences grouping together Swiss-Prot, TrEMBL and Protein Information Resource Other databases: Protein Data Bank, Ensembl and InterPro Specialised genomic databases: BOLD, Saccharomyces Genome Database, FlyBase, VectorBase, WormBase, PHI-base, Arabidopsis Information Resource and Zebrafish Information Network

Software	BLAST Bowtie Clustal HMMER MUSCLE SAMtools TopHat

Other	Server: ExPASy Ontology: Gene Ontology

Institutions	European Bioinformatics Institute US National Center for Biotechnology Information Swiss Institute of Bioinformatics Japanese Institute of Genetics Broad Institute Wellcome Trust Sanger Institute

Meetings	Intelligent Systems for Molecular Biology (ISMB) Research in Computational Molecular Biology (RECOMB) European Conference on Computational Biology (ECCB) Pacific Symposium on Biocomputing (PSB) ISCB Africa ASBCB Conference on Bioinformatics Basel Computational Biology Conference‎ ([BC²])

Computational biology List of biological databases Sequencing Sequence database Sequence alignment Molecular phylogenetics

This article is issued from Wikipedia - version of the 12/26/2014. The text is available under the Creative Commons Attribution/Share Alike but additional terms may apply for the media files.